Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015933081.1_cds_XP_016479481.1_71025
CDS Infomation

[gene=LOC107800769] [db_xref=GeneID:107800769] [protein=cytokinin dehydrogenase 3-like] [protein_id=XP_016479481.1] [location=complement(join(16983..17271,18673..18941,19286..19544,19760..19889,21546..22170))] [gbkey=CDS]
Sequence

ATGGCTAAACTTTATTCCCTAGGTTACTTAGTTATATTCTTCACCATTAGCCGTTTAGTG
TCCATCATAGGTAAACCTTCAATTACAAATGAAGTTCTTTCCCACCTTGATATTGCAACA
AGACTTAGTGTAAATATTTCAGATGCCACTATAGCAACTTCCACTGATTTTGGAAAACTT
GTTCAAGAAATCCCAGCTGCAGTTCTTTACCCTTCCTCCATTCATGACATTGTTAAGCTC
ATAAACTACTCCAACAATGGCGCCATTTCTGCCCCTTTTGGCGTCGCGGCGAGAGGACAT
GGCCATTCAGTGAGGGGACAAGCCATGTCACCAAATGGGGTTGTGGTGGTCATGAGTTCT
TTGAATAATAATAATAATAATAATAATGGAAAAATTGGGGTTTTTTGGGAGAGTAGTTTA
GGGTTTTATTATGCAGATGTGGGAGGTGAGCAGCTTCGGATTGATGTTTTGCATGCCACT
TTAGAGCATGGACTTGCACCTGTCTCTTGGACTGATTATTTATATCTCTCCGTTGGAGGA
ACTCTCTCTAATGCTGGAATTAGTGGCCAAACTTTCAAATATGGTCCTCAGATTAGTAAT
GTTCTTGAAATGGATGTTATCACACGTAAAGGGGAACTTGTCACTTGTTCCAAGCGGACA
AATTCGGAGCTGTTTTTTGCAGTTTTAGGAAGTCTAGGCCAGTTTGGGATCATAATCAGA
GCAAGAATTGTCTTAGAGAAAGCACCAACAAGAGTNNNNNNNNNNNNNNNNNNNTATAGT
GATTTTTCAAAATTCACAAGAGACCAAGAAAAACTGATCTCCATTAATGATGGCATGGAC
TATGTGGAAGGCTCTCTAATGATGAATCAAAGTCCTCCAAATAATTGGAGATCTTCTTTT
TTCTCAACTTCCAACCAATCTAAAATACTTTCCTTGATATCCAAATATGGAATTATCTAC
TGTTTGGAAATGGTCAAGTACTATGATGATCAGACTGCTAATACAGTTGATAAGGAATTG
CAGAAGATGATGAGAGGTTTGAACTTTGTGTTTGGACACATATTCAAGAAAGATACAGCC
TTTGTACATTTTCTGAATAGAGTGAGAAGTGGTGAGCTAATGTTGCAATCAAAGGGAATG
TGGGATGTTCCTCACCCTTGGCTCAATCTCTTTGTACCAAAGTCCAGTATTATGGACTTT
AATGTTGGTGTCTTTTTGGACATCATTCTCAGACAAAACAAGTCCACAGGACCTATTCTT
GTGTACCCAACAACCAGAAAAAGATGGGATGATCGGATGTCTGTTGTGATACCAGAAGAG
GACACATTCTACTGCGTAGGGCTATTGCATTCTAGTAGATTCAATGACTGGGAAGTTTTG
GATGGACAAAATGAAGAAATCATAAACTGCTGTGAAAAAGCTGGTCTCAACGTCAAGCAG
TATCTTCCGCATTACAAAACCAAGGAAGCTTGGATGAATCATTTTGGCAAAAAATGGAAA
ATATTTCAACAAAGGAAAAGTCAGTTTGATCCAAAGATGATTCTGTCACCAGGACAAAAG
ATTTTCATTTAG

Peptide Sequence

PEP ID

XP_016479481.1
PEP Infomation

PREDICTED: cytokinin dehydrogenase 3-like [Nicotiana tabacum]
Sequence

MAKLYSLGYLVIFFTISRLVSIIGKPSITNEVLSHLDIATRLSVNISDATIATSTDFGKL
VQEIPAAVLYPSSIHDIVKLINYSNNGAISAPFGVAARGHGHSVRGQAMSPNGVVVVMSS
LNNNNNNNNGKIGVFWESSLGFYYADVGGEQLRIDVLHATLEHGLAPVSWTDYLYLSVGG
TLSNAGISGQTFKYGPQISNVLEMDVITRKGELVTCSKRTNSELFFAVLGSLGQFGIIIR
ARIVLEKAPTRVXXXXXXYSDFSKFTRDQEKLISINDGMDYVEGSLMMNQSPPNNWRSSF
FSTSNQSKILSLISKYGIIYCLEMVKYYDDQTANTVDKELQKMMRGLNFVFGHIFKKDTA
FVHFLNRVRSGELMLQSKGMWDVPHPWLNLFVPKSSIMDFNVGVFLDIILRQNKSTGPIL
VYPTTRKRWDDRMSVVIPEEDTFYCVGLLHSSRFNDWEVLDGQNEEIINCCEKAGLNVKQ
YLPHYKTKEAWMNHFGKKWKIFQQRKSQFDPKMILSPGQKIFI

Transcript Sequence

Gene sequence data has not been registered.